Files in rtmag/forkedTF
Creation of Forked-Position Weight Matrices, a graph model of multiple PWMs.
.DS_Store
.Rbuildignore
.Rproj.user/3826EF82/sources/prop/1C2C677B
.Rproj.user/3826EF82/sources/prop/350C8F55
.Rproj.user/3826EF82/sources/prop/5F0FD51C
.Rproj.user/3826EF82/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitignore
DESCRIPTION
FPWM.Rproj
LICENSE.txt
NAMESPACE
R/FPWMClassObj.R
R/createFPWM.R
R/extractEnrichment.R
R/importChromSizes.R
R/intersectPeakMatrix.R
R/loadChromFile.R
R/loadChromSizes.R
R/miniCofactorReport.R
R/plotFPWM.R
R/shuffle.R
R/write.FPWM.R
README.md
inst/FPWM_format_venn.png
inst/MM1_HSA_HepG2_JUND_cofactor_minireport-1.png
inst/MM1_HSA_K562_CEBPB_cofactor_minireport.png
inst/extdata/hg19.genome
inst/extdata/hg38.genome
inst/fpwm_plot.png
inst/test_qsignificance-1.png
man/createFPWM.Rd
man/extractEnrichment.Rd
man/importChromSizes.Rd
man/intersectPeakMatrix.Rd
man/loadChromFile.Rd
man/loadChromSizes.Rd
man/miniCofactorReport.Rd
man/plotFPWM.Rd
man/shuffle.Rd
man/write.FPWM.Rd
