Man pages for rtmag/forkedTF
Creation of Forked-Position Weight Matrices, a graph model of multiple PWMs.
| createFPWM | A function to generate an FPWM class object. |
| extractEnrichment | Extract enrichment |
| importChromSizes | Import chromosomes sizes |
| intersectPeakMatrix | intersectPeakMatrix |
| loadChromFile | Load chromosomes sizes file |
| loadChromSizes | Load chromosomes sizes |
| miniCofactorReport | Produces a miniCofactorReport |
| plotFPWM | A function to plot the Forked Position Weight Matrix |
| shuffle | Shuffle |
| write.FPWM | Writes the FPWM in transfac or FPWMtransfac format |
