onesim_plot: Plot a graph of output for one parameter combinations
In rucky151/shapp1: Scenario Analysis for Seed Health

Description Usage Arguments Details Examples

View source: R/onesim_plot.R

This function simulates one parameter combination across nseasons once

onesim_plot(pHSinit = 0.8, Kx = 100, betax = 0.02, wxtnormm = 0.8,
  wxtnormsd = 0.3, hx = 1, mxtnormm = 1, mxtnormsd = 0.1,
  axtnormm = 1, axtnormsd = 0.1, rx = 0.1, zxtnormm = 1,
  zxtnormsd = 0.1, gx = 4, cx = 0.9, phix = 0, nseasons = 10,
  HPcut = 0.5, pHScut = 0.5, maY = 100, miY = 0, thetax = 0.2,
  Ex = 0)

`pHSinit`	the initial proportion of healthy seed, numeric or numeric vector.
`Kx`	the total number of plants, positive interger, numeric or numeric vector.
`betax`	the maximum seasonal transmission rate, numeric or numeric vector.
`wxtnormm`	the environmental effect on transmission rate (mean of underlying normal distribution prior to truncation), numeric or numeric vector.
`wxtnormsd`	the environmental effect on transmission rate (standard deviation of underlying normal distribution prior to truncation), numeric or numeric vector.
`hx`	the host effect on transmission rate, numeric or numeric vector.
`mxtnormm`	the vector management effect on transmission rate (mean of underlying normal distribution prior to truncation), numeric or numeric vector.
`mxtnormsd`	the vector management effect on transmission rate (standard deviation of underlying normal distribution prior to truncation), numeric or numeric vector.
`axtnormm`	the roguing effect in terms of decreased DP (mean of underlying normal distribution prior to truncation), numeric or numeric vector.
`axtnormsd`	the roguing effect in terms of decreased DP (standard deviation of underlying normal distribution prior to truncation), numeric or numeric vector.
`rx`	the reversion rate, numeric or numeric vector.
`zxtnormm`	the proportional selection against diseased plants (mean of underlying normal distribution prior to truncation), numeric or numeric vector.
`zxtnormsd`	the proportional selection against diseased plants (standard deviation of underlying normal distribution prior to truncation), numeric or numeric vector.
`gx`	the seed production rate in healthy plants, numeric or numeric vector.
`cx`	the proportional seed production rate in diseased plants, numeric or numeric vector.
`phix`	the proportion clean seed purchased, numeric or numeric vector.
`nseasons`	the number of seasons, numeric or numeric vector.
`HPcut`	the proportion healthy plant number cutoff, numeric or numeric vector.
`pHScut`	the proportion healthy seed cutoff, numeric or numeric vector.
`maY`	the maximum attainable yield, end of season, in the absence of disease, numeric or numeric vector.
`miY`	the minimum yield when all plants are diseased (useable yield despite disease), numeric or numeric vector.
`thetax`	the rate of decline of Yld with increasing disease incidence, numeric or numeric vector.
`Ex`	the amount of external inoculum around field, numeric or numeric vector.