get_gini: Compute Gini coefficients for single cells
In rujinwang/SCOPE: A normalization and copy number estimation method for single-cell DNA sequencing
get_gini R Documentation
Compute Gini coefficients for single cells
Description
Gini index is defined as two times the area
between the Lorenz curve and the diagonal.
Usage
get_gini(Y)
Arguments
Y
raw read depth matrix after quality control procedure
Value
Gini
Vector of Gini coefficients for single cells
from scDNA-seq
Author(s)
Rujin Wang rujin@email.unc.edu
Examples
Gini <- get_gini(Y_sim)
rujinwang/SCOPE documentation built on Jan. 1, 2023, 5:40 a.m.
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| get_gini | R Documentation |
Compute Gini coefficients for single cells
Description
Gini index is defined as two times the area between the Lorenz curve and the diagonal.
Usage
get_gini(Y)
Arguments
Y |
raw read depth matrix after quality control procedure |
Value
Gini |
Vector of Gini coefficients for single cells from scDNA-seq |
Author(s)
Rujin Wang rujin@email.unc.edu
Examples
Gini <- get_gini(Y_sim)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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