unnest_parts: Expand the exonic/intronic parts of a gene into a long...

In sa-lee/superintronic: Tools for Working with Intron Signal

Description

Expand the exonic/intronic parts of a gene into a long GRanges object

Usage

unnest_parts(x)

Arguments

x	a GRanges object from collect_parts()

Details

This function restricts the expands/unnests, the ranges from collect_parts the result is a GRanges object with the following columns:

• gene_id, the gene_id from features corresponding to an exon/intron.

• feature_type, whether the range corresponds to an exon or intro feature.

• feature_rank, the rank of the exon/intron feature within a gene.

• feature_length, the width of the exon/intron

• feature_strand, the strand of the exon/intron

Value

a GRanges object

sa-lee/superintronic documentation built on Feb. 18, 2020, 10:36 a.m.