Files in saeyslab/FlowSOM_workshop
How to get started with FlowSOM
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
FlowSOMworkshop.Rproj
NAMESPACE
R/FlowSOM_subset.R
R/compute_wilcox.R
R/gating_subset.R
R/get_pctgs.R
R/installation.R
R/label_metaclusters.R
R/manual_vector.R
R/parse_flowjo.R
R/parse_markertable.R
R/plotSNE_manual_gating.R
R/plotSNE_marker.R
R/plot_MFIs.R
R/plot_aggregate.R
R/plot_pctgs.R
R/prepare_fcs_files.R
R/query_multiple.R
R/simulate_batch.R
README.md
inst/extdata/21-10-15_Tube_011.fcs
inst/extdata/21-10-15_Tube_011_Live.fcs
inst/extdata/21-10-15_Tube_012.fcs
inst/extdata/21-10-15_Tube_012_Live.fcs
inst/extdata/21-10-15_Tube_013.fcs
inst/extdata/21-10-15_Tube_013_Live.fcs
inst/extdata/21-10-15_Tube_028.fcs
inst/extdata/21-10-15_Tube_028_Live.fcs
inst/extdata/21-10-15_Tube_030.fcs
inst/extdata/21-10-15_Tube_030_Live.fcs
inst/extdata/21-10-15_Tube_031.fcs
inst/extdata/21-10-15_Tube_031_Live.fcs
inst/extdata/Populations and markers.xlsx
inst/extdata/cyto.RData
inst/extdata/manualGating.pdf
inst/extdata/manualGating.wsp
inst/extdata/manualGating_Live.wsp
man/FlowSOM_subset.Rd
man/gating_subset.Rd
man/get_pctgs.Rd
man/manual_vector.Rd
man/parse_flowjo.Rd
man/parse_markertable.Rd
man/plotSNE_manual_gating.Rd
man/plotSNE_marker.Rd
man/plot_aggregate.Rd
man/query_multiple.Rd
vignettes/.build.timestamp
vignettes/1_R_Intro.Rmd
vignettes/2_FlowCytometryData.Rmd
vignettes/3_QualityControl.Rmd
vignettes/4_tSNE.Rmd
vignettes/5_FlowSOM.Rmd
vignettes/FlowSOMWorkshop.Rmd
vignettes/tsne_flowsom.Rmd
