manual_vector: Summarise the gating matrix into one vector, only including...
In saeyslab/FlowSOM_workshop: How to get started with FlowSOM
Description
Usage
Arguments
Value
View source: R/manual_vector.R
Description
Extract the compensated and transformed data and all gate labels.
Usage
1
manual_vector(manual_matrix, cell_types)
Arguments
manual_matrix
Matrix containing boolean values, indicating for every
gate (column) whether the cell (row) is part of it or not.
cell_types
Cell types to use in the summary vector. All others will be
ignored and cells which do not fall in one of these gates
will get the label "Unknown". Order is important!
Value
A factor with one label for every cell
saeyslab/FlowSOM_workshop documentation built on Sept. 3, 2021, 9:21 a.m.
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Description Usage Arguments Value
View source: R/manual_vector.R
Description
Extract the compensated and transformed data and all gate labels.
Usage
1 | manual_vector(manual_matrix, cell_types)
|
Arguments
manual_matrix |
Matrix containing boolean values, indicating for every gate (column) whether the cell (row) is part of it or not. |
cell_types |
Cell types to use in the summary vector. All others will be ignored and cells which do not fall in one of these gates will get the label "Unknown". Order is important! |
Value
A factor with one label for every cell
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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