Man pages for saezlab/mistyR
Multiview Intercellular SpaTial modeling framework
| add_juxtaview | Generate and add a juxtaview to the current view composition |
| add_paraview | Generate and add a paraview to the current view composition |
| add_views | Add custom views to the current view composition |
| clear_cache | Clear cached objects |
| collect_results | Collect and aggregate results |
| create_initial_view | *Start here:* create a basic view composition with an... |
| create_view | Create a custom view |
| extract_signature | Extract signatures from the results |
| filter_views | Filter spatial units |
| plot_contrast_heatmap | Plot heatmap of local contrast between two views |
| plot_contrast_results | Plot heatmap of contrast between two result lists |
| plot_improvement_stats | Plot observed performance and improvement per target |
| plot_interaction_communities | Plot marker interaction communities |
| plot_interaction_heatmap | Plot importance heatmap for a view |
| plot_view_contributions | Plot view contributions per target |
| reexports | Objects exported from other packages |
| remove_views | Remove views from the current view composition |
| rename_view | Rename view in a view composition |
| run_misty | Train MISTy models |
| select_markers | Select a subset of markers in a view |
| synthetic | Synthetic benchmark data for mistyR |
