saezlab/progeny: Pathway RespOnsive GENes for activity inference from gene expression

PROGENy is resource that leverages a large compendium of publicly available signaling perturbation experiments to yield a common core of pathway responsive genes for human and mouse. These, coupled with any statistical method, can be used to infer pathway activities from bulk or single-cell transcriptomics.

Getting started

Package details

Bioconductor views FunctionalPrediction GeneExpression GeneRegulation SystemsBiology
Maintainer
LicenseApache License (== 2.0) | file LICENSE
Version1.17.3
URL https://github.com/saezlab/progeny
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("saezlab/progeny")
saezlab/progeny documentation built on Feb. 9, 2023, 2:21 p.m.