saezlab/progeny: Pathway RespOnsive GENes for activity inference from gene expression

This package provides a function to infer pathway activity from gene expression using PROGENy. It contains the linear model we inferred in the publication "Perturbation-response genes reveal signaling footprints in cancer gene expression".

Getting started

Package details

Bioconductor views FunctionalPrediction GeneExpression GeneRegulation SystemsBiology
Maintainer
LicenseApache License (== 2.0) | file LICENSE
Version1.11.2
URL https://github.com/saezlab/progeny
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("saezlab/progeny")
saezlab/progeny documentation built on Sept. 4, 2020, 3:34 p.m.