GetMatAdj: Returns the contains of the slot processing of an object of...

View source: R/utils.R

GetMatAdjR Documentation

Returns the contains of the slot processing of an object of class MSnSet

Description

Returns the contains of the slot processing of an object of class MSnSet

Usage

GetMatAdj(obj)

Arguments

obj

An object (peptides) of class MSnSet.

Value

The slot processing of obj@processingData

Author(s)

Samuel Wieczorek

Examples

utils::data(Exp1_R25_pept, package='DAPARdata')
Xshared <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", FALSE)
Xunique <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", TRUE)
ll.X <- list(matWithSharedPeptides = Xshared, matWithUniquePeptides = Xunique)
Exp1_R25_pept <- SetMatAdj(Exp1_R25_pept, ll.X)
ll.X <- GetMatAdj(Exp1_R25_pept)


samWieczorek/DAPAR documentation built on May 6, 2022, 5:30 p.m.