Set_POV_MEC_tags: Sets the MEC tag in the metacell

In samWieczorek/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R

Sets the MEC tag in the metacell

Description

This function is based on the metacell dataframe to look for either missing values (used to update an initial dataset) or imputed values (used when post processing protein metacell after aggregation)

Usage

Set_POV_MEC_tags(conds, df, level)

Arguments

conds	xxx
df	An object of class MSnSet
level	Type of entity/pipeline

Value

An instance of class MSnSet.

Author(s)

Samuel Wieczorek

Examples

utils::data(Exp1_R25_pept, package='DAPARdata')
obj <- Exp1_R25_pept[1:10]
cols.for.ident <- obj@experimentData@other$names_metacell
conds <- Biobase::pData(obj)$Condition
df <- Biobase::fData(obj)[, cols.for.ident]
df <- Set_POV_MEC_tags(conds, df, level = 'peptide')

samWieczorek/DAPAR documentation built on May 6, 2022, 5:30 p.m.