plot.Pupil_window_data: Pre-prepared plots of PupillometryR data

In samhforbes/PupillometryR: A Unified Pipeline for Pupillometry Data

Pre-prepared plots of PupillometryR data

Description

The plot functions are designed to run with just data and pupil selections, with some additional options for fun with plotting. To see these plots, you must first use create_window_data.

Usage

## S3 method for class 'Pupil_window_data'
plot(
  x,
  pupil,
  windows = c(FALSE, TRUE),
  geom = c("raincloud", "violin", "boxplot"),
  ...
)

Arguments

x	A Pupil_window_data dataframe
pupil	Column name of pupil data to be plotted
windows	Whether you want to include time windows in the plot - logical
geom	violin plots or boxplots. The newest version adds raincloud plots using Ben Marwick's flat violin plot.
...	Ignored

Value

A ggplot object

Examples

Sdata <- make_pupillometryr_data(data = pupil_data,
                               subject = ID,
                               trial = Trial,
                               time = Time,
                               condition = Type)
regressed_data <- regress_data(data = Sdata, pupil1 = RPupil, pupil2 = LPupil)
mean_data <- calculate_mean_pupil_size(data = regressed_data,
pupil1 = RPupil, pupil2 = LPupil)
base_data <- baseline_data(data = mean_data, pupil = mean_pupil, start = 0, stop = 100)
window <- create_window_data(data = base_data,pupil = mean_pupil)
p <-plot(window, pupil = mean_pupil, windows = FALSE, geom = 'boxplot')
p

samhforbes/PupillometryR documentation built on Sept. 25, 2023, 10:19 a.m.