sandraTL/PathQuant: Annotation of gene-metabolite pairs using topology of KEGG metabolic pathway maps
Version 0.1.1

Modeling of KEGG metabolism pathway maps into compound graph format to compute shortest reactional distance (srd) for gene-metabolite pairs to assess their biological relevance and output results in data.frame and graphical outputs.

Getting started

Package details

AuthorSandra Therrien-Laperriere <[email protected]> Sarah Cherkaoui <[email protected]>
MaintainerSandra Therrien-Laperriere <[email protected]>
LicenseGNU-3
Version0.1.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("sandraTL/PathQuant")
sandraTL/PathQuant documentation built on June 6, 2017, 10:24 p.m.