Files in sandraTL/PathQuant

Annotation of gene-metabolite pairs using topology of KEGG metabolic pathway maps

.Rbuildignore

.Rd2pdf763/Rd2.tex

.Rd2pdf779/Rd2.tex

.gitignore

CPS1.png

DESCRIPTION

NAMESPACE

PathQuant.Rproj

R/Graph.R R/PermutationFunction.R R/Script_Agilent.R R/Utils.R R/annotation.R R/barplotFunction.R R/compoundListFunctions.R R/dataFrameFunctions.R R/edgeListFunctions.R R/extractingKGMLfromKEGG.R R/geneClassification.R R/geneEnzyme.R R/geneOrthology.R R/graphFunctions.R R/heatmapFunction.R R/manageMemory.R R/parseAllMapsFIle.R R/parseXML.R R/searchAllMaps.R R/test_mainFunctions.R README.md

data/completeGeneDF.rda

data/completeMetaboDF.rda

data/shin.rda

hmdb_info.txt

inst/hmdb_info.txt

man/exportDFtoTxt.Rd man/permutationTest.Rd manual.pdf

results.xls

results2.xls

tests/testthat/test-distanceGeneToAllMetabolite.R tests/testthat/test-extractingKGMLfromKEGG.R tests/testthat/test-getDistanceAll.R tests/testthat/test-getDistanceAsso.R tests/testthat/test-heatmapFunction.R

vignettes/.build.timestamp

vignettes/CPS1.png

vignettes/GLS2.png

vignettes/heatmapAsso1.png

vignettes/permutations1000.png

vignettes/srd.distribution.png

vignettes/vignette.Rmd

vignettes/vignette.html

sandraTL/PathQuant documentation built on May 29, 2019, 1:45 p.m.