CpGs_in_MEAT2.0: Description of the CpGs used in MEAT2.0
In sarah-voisin/MEAT: Muscle Epigenetic Age Test

Detailed information on the 156 CpGs automatically selected by the elastic net model.

1	CpGs_in_MEAT2.0

A data frame with 157 rows and 6 variables:

CpG: CpG name
Coefficient: Weight given by the elastic net model to the CpG
Chromosome: Chromosome where the CpG is located
Position: Position in bp where the CpG is located (human genome build version hg38)
Gene: Gene annotated to the CpG. Each CpG was annotated to one or more genes using the annotation file from Zhou et al. to which we added annotation to long-range interaction promoters using chromatin states in male skeletal muscle from the Roadmap Epigenomics Project and GeneHancer information from the Genome Browser (hg38).
Chromatin_state_male_SM: Chromatin state in male skeletal muscle from the the Roadmap Epigenomics Project)
Chromatin_state_female_SM: Chromatin state in female skeletal muscle from the the Roadmap Epigenomics Project)