BATmeasures: BATmeasures: Measures of basophil activation testing
In saritaupatil/AutoBAT: Automated Analysis of Basophil Activation Testing Flow Cytometry Data
Description
Usage
Arguments
Value
Author(s)
Examples
Description
BATmeasures: Measures of basophil activation testing
Usage
1
BATmeasures(data, groupvariables, output.file)
Arguments
data
A dataframe that contains several variables:
groupvariables which is a grouping variable that identifies all the conditions in a dose-response curve, agconc which is the antigen concentration used in basophil stimulation, and CD63hi which is the percentage of CD63hi basophils from flow analysis in each stimulation condition)
groupvariables
The variable name of the grouping variable from the data
output.file
The name of the output file
Value
This function analyzes basophil activation dose-response curve to produce measures of basophil activation
A csv file containing calculated AUC and ED50 values based on input data
Author(s)
Sarita Patil, sarita.patil@mgh.harvard.edu
Examples
1
BATmeasures(data, patientid, output.file="BAT_AUC_ED50.csv")
saritaupatil/AutoBAT documentation built on May 29, 2019, 1:25 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
BATmeasures: Measures of basophil activation testing
Usage
1 | BATmeasures(data, groupvariables, output.file)
|
Arguments
data |
A dataframe that contains several variables: groupvariables which is a grouping variable that identifies all the conditions in a dose-response curve, agconc which is the antigen concentration used in basophil stimulation, and CD63hi which is the percentage of CD63hi basophils from flow analysis in each stimulation condition) |
groupvariables |
The variable name of the grouping variable from the data |
output.file |
The name of the output file |
Value
This function analyzes basophil activation dose-response curve to produce measures of basophil activation
A csv file containing calculated AUC and ED50 values based on input data
Author(s)
Sarita Patil, sarita.patil@mgh.harvard.edu
Examples
1 | BATmeasures(data, patientid, output.file="BAT_AUC_ED50.csv")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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