Files in sba1/mgsa-bioc
Model-based gene set analysis
.Rbuildignore
.gitignore
.travis.yml
CHANGES
DESCRIPTION
NAMESPACE
R/MgsaGoSets-class.R
R/MgsaResults-class.R
R/MgsaSets-class.R
R/dottedTable.R
R/mgsa-methods.R
R/mgsa-package.R
R/zzz.R
README.md
acinclude.m4
aclocal.m4
cleanup
configure
configure.ac
data/example.rda
inst/example_files/gene_association_head.sgd
man/MgsaGoSets-class.Rd
man/MgsaMcmcResults-class.Rd
man/MgsaResults-class.Rd
man/MgsaSets-class.Rd
man/alphaMcmcPost-methods.Rd
man/alphaPost-methods.Rd
man/betaMcmcPost-methods.Rd
man/betaPost-methods.Rd
man/createMgsaGoSets.Rd
man/example-go.Rd
man/example-o.Rd
man/itemAnnotations-methods.Rd
man/itemIndices-methods.Rd
man/length-methods.Rd
man/mgsa-methods.Rd
man/mgsa-package.Rd
man/nsamples-methods.Rd
man/pMcmcPost-methods.Rd
man/pPost-methods.Rd
man/plot-MgsaResults-method.Rd
man/populationSize-methods.Rd
man/readGAF.Rd
man/restarts-methods.Rd
man/setAnnotations-methods.Rd
man/setsMcmcPost-methods.Rd
man/setsResults-methods.Rd
man/show-MgsaResults-method.Rd
man/show-MgsaSets-method.Rd
man/steps-methods.Rd
man/studySetSizeInPopulation-methods.Rd
man/subMgsaSets-methods.Rd
script/README
script/TODO
script/buildman.sh
script/demo.R
script/test.R
script/test2.R
script/test_GO.R
script/test_signature.R
script/vignette_quick_example.R
src/Makevars.in
src/mgsa-core.c
src/mgsa-core.h
src/mgsa.c
src/mt.c
src/mt.h
src/mt19937p/example-mt.c
src/mt19937p/mt19937p.c
src/mt19937p/mt19937p.h
tests/testthat.R
tests/testthat/gene_association_head.goa_ref_human.gz
tests/testthat/test-mgsa.R
tests/testthat/test-readGAF.R
tests/testthat/test-subMgsaSets.R
vignettes/mgsa.Rnw
