ClinicoPath: Analysis for Clinicopathological Research

# This file is automatically generated, you probably don't want to edit this

.jmvrefs <- list(
    `emmeans`=list(
        `type`="software", 
        `author`="Lenth, R.", 
        `year`=2018, 
        `title`="emmeans: Estimated Marginal Means, aka Least-Squares Means", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=emmeans", 
        `url`="https://CRAN.R-project.org/package=emmeans"), 
    `afex`=list(
        `type`="software", 
        `author`="Singmann, H.", 
        `year`=2018, 
        `title`="afex: Analysis of Factorial Experiments", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=afex", 
        `url`="https://CRAN.R-project.org/package=afex"), 
    `R`=list(
        `type`="software", 
        `author`="R Core Team", 
        `year`=2018, 
        `title`="A Language and Envionment for Statistical Computing", 
        `publisher`="[Computer software]. Retrieved from https://CRAN.R-project.org/", 
        `url`="https://CRAN.R-project.org/"), 
    `BF`=list(
        `type`="software", 
        `author`="Morey, R. D., & Rouder, J. N.", 
        `year`=2018, 
        `title`="BayesFactor: Computation of Bayes Factors for Common Designs", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=BayesFactor", 
        `url`="https://CRAN.R-project.org/package=BayesFactor"), 
    `btt`=list(
        `type`="article", 
        `author`="Rouder, J. N., Speckman, P. L., Sun, D., Morey, R. D., & Iverson, G.", 
        `year`=2009, 
        `title`="Bayesian t tests for accepting and rejecting the null hypothesis", 
        `publisher`="Psychonomic Bulletin & Review", 
        `volume`=16, 
        `pages`="225-237"), 
    `car`=list(
        `type`="software", 
        `author`="Fox, J., & Weisberg, S.", 
        `year`=2018, 
        `title`="car: Companion to Applied Regression", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=car", 
        `url`="https://CRAN.R-project.org/package=car"), 
    `ggplot2`=list(
        `type`="software", 
        `author`="Wickham, H., Chang, W., Henry, L., Pedersen, T. L., Takahashi, K., Wilke, C., Woo, K., & RStudio", 
        `year`=2018, 
        `title`="ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=ggplot2", 
        `url`="https://CRAN.R-project.org/package=ggplot2"), 
    `ggridges`=list(
        `type`="software", 
        `author`="Wilke, C., & RStudio", 
        `year`=2018, 
        `title`="ggridges: Ridgeline Plots in ggplot2", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=ggridges", 
        `url`="https://CRAN.R-project.org/package=ggridges"), 
    `mvnormtest`=list(
        `type`="software", 
        `author`="Jarek, S.", 
        `year`=2012, 
        `title`="mvnormtest: Normality test for multivariate variables", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=mvnormtest", 
        `url`="https://CRAN.R-project.org/package=mvnormtest"), 
    `PMCMR`=list(
        `type`="software", 
        `author`="Pohlert, T.", 
        `year`=2018, 
        `title`="PMCMR: Calculate Pairwise Multiple Comparisons of Mean Rank Sums", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=PMCMR", 
        `url`="https://CRAN.R-project.org/package=PMCMR"), 
    `ROCR`=list(
        `type`="software", 
        `author`="Sing, T., Sander, O., Beerenwinkel, N., & Lengauer, T.", 
        `year`=2015, 
        `title`="ROCR: Visualizing the Performance of Scoring Classifiers", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=ROCR", 
        `url`="https://CRAN.R-project.org/package=ROCR"), 
    `nnet`=list(
        `type`="software", 
        `author`="Ripley, B., Venables W.", 
        `year`=2016, 
        `title`="nnet: Feed-Forward Neural Networks and Multinomial Log-Linear Models", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=nnet", 
        `url`="https://CRAN.R-project.org/package=nnet"), 
    `MASS`=list(
        `type`="software", 
        `author`="Ripley, B., Venables W., Bates, D. M., Hornik, K., Gebhardt, A., & Firth, D.", 
        `year`=2018, 
        `title`="MASS: Support Functions and Datasets for Venables and Ripley's MASS", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=MASS", 
        `url`="https://CRAN.R-project.org/package=MASS"), 
    `vcd`=list(
        `type`="software", 
        `author`="Meyer, D., Zeileis, A., Hornik, K., Gerber, F., & Friendly, M.", 
        `year`=2017, 
        `title`="vcd: Visualizing Categorical Data", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=vcd", 
        `url`="https://CRAN.R-project.org/package=vcd"), 
    `vcdExtra`=list(
        `type`="software", 
        `author`="Friendly M., Turner, H., Zeileis, A., Murdoch, D., & Firth, D.", 
        `year`=2017, 
        `title`="vcdExtra: 'vcd' Extensions and Additions", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=vcdExtra", 
        `url`="https://CRAN.R-project.org/package=vcdExtra"), 
    `exact2x2`=list(
        `type`="software", 
        `author`="Fay, M. P., Hunsberger, S. A., Nason, M., & Gabriel, E.", 
        `year`=2018, 
        `title`="exact2x2: Exact Tests and Confidence Intervals for 2x2 Tables", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=exact2x2", 
        `url`="https://CRAN.R-project.org/package=exact2x2"), 
    `psych`=list(
        `type`="software", 
        `author`="Revelle, W.", 
        `year`=2019, 
        `title`="psych: Procedures for Psychological, Psychometric, and Personality Research", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=psych", 
        `url`="https://CRAN.R-project.org/package=psych"), 
    `lavaan`=list(
        `type`="software", 
        `author`="Rosseel, Y., et al.", 
        `year`=2018, 
        `title`="lavaan: Latent Variable Analysis", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=lavaan", 
        `url`="https://CRAN.R-project.org/package=lavaan"), 
    `semPlot`=list(
        `type`="software", 
        `author`="Epskamp, S.", 
        `year`=2017, 
        `title`="semPlot: Path Diagrams and Visual Analysis of Various SEM Packages' Output", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=semPlot", 
        `url`="https://CRAN.R-project.org/package=semPlot"), 
    `ggstatsplot`=list(
        `type`="software", 
        `author`="Patil, I.", 
        `year`=2018, 
        `title`="ggstatsplot: 'ggplot2' Based Plots with Statistical Details", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=ggstatsplot", 
        `url`="https://CRAN.R-project.org/package=ggstatsplot", 
        `doi`="10.5281/zenodo.2074621"), 
    `report`=list(
        `type`="software", 
        `author`="Makowski, Dominique, L\u00FCdecke, Daniel", 
        `year`=2019, 
        `title`="The report package for R: Ensuring the use of best practices for results reporting", 
        `publisher`="[R package]. Retrieved from https://github.com/easystats/report", 
        `url`="https://github.com/easystats/report"), 
    `arsenal`=list(
        `type`="software", 
        `author`="Heinzen, E Sinnwell, J Atkinson, E Gunderson, T Dougherty, G", 
        `year`=2018, 
        `title`="arsenal: An Arsenal of 'R' Functions for Large-Scale Statistical Summaries", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=arsenal", 
        `url`="https://CRAN.R-project.org/package=arsenal"), 
    `tangram`=list(
        `type`="software", 
        `author`="Garbett, S.", 
        `year`=2018, 
        `title`="tangram: The Grammar of Tables", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=tangram", 
        `url`="https://CRAN.R-project.org/package=tangram"), 
    `irr`=list(
        `type`="software", 
        `author`="Matthias Gamer, Jim Lemon, Ian Fellows, Puspendra Singh", 
        `year`=2019, 
        `title`="Various Coefficients of Interrater Reliability and Agreement.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=irr", 
        `url`="https://CRAN.R-project.org/package=irr"), 
    `tableone`=list(
        `type`="software", 
        `author`="Kazuki, Y.", 
        `year`=2019, 
        `title`="tableone: Create 'Table 1' to Describe Baseline Characteristics", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=tableone", 
        `url`="https://CRAN.R-project.org/package=tableone"), 
    `janitor`=list(
        `type`="software", 
        `author`="Firke, S.", 
        `year`=2019, 
        `title`="janitor: Simple Tools for Examining and Cleaning Dirty Data.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=janitor", 
        `url`="https://CRAN.R-project.org/package=janitor"), 
    `finalfit`=list(
        `type`="software", 
        `author`="Ewen Harrison and Tom Drake and Riinu Ots", 
        `year`=2019, 
        `title`="finalfit: Quickly Create Elegant Regression Results Tables and Plots when Modelling", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=finalfit", 
        `url`="https://CRAN.R-project.org/package=finalfit"), 
    `caret`=list(
        `type`="software", 
        `author`="Max Kuhn", 
        `year`=2020, 
        `title`="caret: Classification and Regression Training", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=caret", 
        `url`="https://CRAN.R-project.org/package=caret"), 
    `psycho`=list(
        `type`="software", 
        `author`="Makowski, D.", 
        `year`=2018, 
        `title`="The Psycho Package: An Efficient and Publishing-Oriented Workflow for Psychological Science. Journal of Open Source Software, 3(22), 470.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=psycho.R", 
        `url`="https://CRAN.R-project.org/package=psycho.R"), 
    `survival`=list(
        `type`="software", 
        `author`="Terry M Therneau, Thomas Lumley", 
        `year`=2019, 
        `title`="survival: Survival Analysis", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=survival", 
        `url`="https://CRAN.R-project.org/package=survival"), 
    `survminer`=list(
        `type`="software", 
        `author`="Alboukadel Kassambara and Marcin Kosinski and Przemyslaw Biecek", 
        `year`=2019, 
        `title`="survminer: Drawing Survival Curves using 'ggplot2'", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=survminer", 
        `url`="https://CRAN.R-project.org/package=survminer"), 
    `ggalluvial`=list(
        `type`="software", 
        `author`="Jason Cory Brunson", 
        `year`=2019, 
        `title`="ggalluvial: Alluvial Plots in 'ggplot2'.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=ggalluvial", 
        `url`="https://CRAN.R-project.org/package=ggalluvial"), 
    `explore`=list(
        `type`="software", 
        `author`="Roland Krasser", 
        `year`=2020, 
        `title`="explore: Simplifies Exploratory Data Analysis.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=explore", 
        `url`="https://CRAN.R-project.org/package=explore"), 
    `FFTrees`=list(
        `type`="software", 
        `author`="Nathaniel Phillips, Hansjoerg Neth, Jan Woike and Wolfgang Gaissmaer", 
        `year`=2019, 
        `title`="FFTrees: Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=FFTrees", 
        `url`="https://CRAN.R-project.org/package=FFTrees"), 
    `rpart`=list(
        `type`="software", 
        `author`="Terry Therneau and Beth Atkinson", 
        `year`=2019, 
        `title`="rpart: Recursive Partitioning and Regression Trees.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=rpart", 
        `url`="https://CRAN.R-project.org/package=rpart"), 
    `rpart.plot`=list(
        `type`="software", 
        `author`="Stephen Milborrow", 
        `year`=2019, 
        `title`="rpart.plot: Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=rpart.plot", 
        `url`="https://CRAN.R-project.org/package=rpart.plot"), 
    `gtsummary`=list(
        `type`="software", 
        `author`="Daniel D. Sjoberg, Margie Hannum, Karissa Whiting and Emily C. Zabor", 
        `year`=2020, 
        `title`="gtsummary: Presentation-Ready Data Summary and Analytic Result Tables", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=gtsummary", 
        `url`="https://CRAN.R-project.org/package=gtsummary"), 
    `rmngb`=list(
        `type`="software", 
        `author`="Antoine Filipovic Pierucci", 
        `year`=2014, 
        `title`="rmngb: Miscellaneous Collection of Functions for Medical Data Analysis", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=rmngb", 
        `url`="https://CRAN.R-project.org/package=rmngb"), 
    `RVAideMemoire`=list(
        `type`="software", 
        `author`="Maxime Herv\u00E9", 
        `year`=2020, 
        `title`="RVAideMemoire: Testing and Plotting Procedures for Biostatistics", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=RVAideMemoire", 
        `url`="https://CRAN.R-project.org/package=RVAideMemoire"), 
    `easyalluvial`=list(
        `type`="software", 
        `author`="Bjoern Koneswarakantha", 
        `year`=2019, 
        `title`="easyalluvial: Generate Alluvial Plots with a Single Line of Code.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=easyalluvial", 
        `url`="https://CRAN.R-project.org/package=easyalluvial"), 
    `parcats`=list(
        `type`="software", 
        `author`="Bjoern Koneswarakantha", 
        `year`=2019, 
        `title`="parcats: Interactive Parallel Categories Diagrams for 'easyalluvial'", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=parcats", 
        `url`="https://CRAN.R-project.org/package=parcats"), 
    `plotROC`=list(
        `type`="software", 
        `author`="Michael C. Sachs", 
        `year`=2017, 
        `title`="plotROC: A Tool for Plotting ROC Curves.Journal of Statistical Software, Code Snippets, 79(2), 1-19. doi:10.18637/jss.v079.c02", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=plotROC", 
        `url`="https://CRAN.R-project.org/package=plotROC"), 
    `RGraphGallery`=list(
        `type`="website", 
        `author`="Holtz Yan", 
        `year`=2020, 
        `title`="The R Graph Gallery", 
        `publisher`="A website that displays hundreds of R charts https://www.r-graph-gallery.com", 
        `url`="https://github.com/holtzy/R-graph-gallery"), 
    `hrbrthemes`=list(
        `type`="software", 
        `author`="Bob Rudis", 
        `year`=2020, 
        `title`="hrbrthemes: Additional Themes, Theme Components and Utilities for 'ggplot2'.", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=hrbrthemes", 
        `url`="https://CRAN.R-project.org/package=hrbrthemes"), 
    `retractcheck`=list(
        `type`="software", 
        `author`="Chris Hartgerink and Frederik Aust", 
        `year`=2019, 
        `title`="retractcheck: Retraction Scanner", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=retractcheck", 
        `url`="https://CRAN.R-project.org/package=retractcheck"), 
    `RefManageR`=list(
        `type`="software", 
        `author`="McLean MW", 
        `year`=2017, 
        `title`="RefManageR: Import and Manage BibTeX and BibLaTeX References in R. The Journal of Open Source Software.", 
        `doi`="10.21105/joss.00338", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=RefManageR", 
        `url`="https://CRAN.R-project.org/package=RefManageR"), 
    `rcrossref`=list(
        `type`="software", 
        `author`="Scott Chamberlain and Hao Zhu and Najko Jahn and Carl Boettiger and Karthik Ram", 
        `year`=2020, 
        `title`="rcrossref: Client for Various 'CrossRef' 'APIs'", 
        `publisher`="[R package]. Retrieved from https://CRAN.R-project.org/package=rcrossref", 
        `url`="https://CRAN.R-project.org/package=rcrossref"))