alluvialSurvival: Treatment Pathway Alluvial Plot

In sbalci/ClinicoPathJamoviModule: Analysis for Clinicopathological Research

Treatment Pathway Alluvial Plot

Description

Treatment Pathway Alluvial Plot

Usage

alluvialSurvival(
  data,
  timeVar,
  stageVar,
  treatmentVar,
  patientId,
  survivalVar,
  showRightAxis = FALSE,
  colorScheme = "clinical",
  showSurvival = FALSE
)

Arguments

data	.
timeVar	The name of the time variable in the dataset
stageVar	The name of the disease stage variable
treatmentVar	Treatment received at each time point
patientId	Unique patient identifier for tracking
survivalVar	Survival status at each time point
showRightAxis	.
colorScheme	.
showSurvival	.

Value

A results object containing:

results$todo					a html
results$mydataview					a preformatted
results$plot					an image
results$summaryTable					a table
results$survivalStats					a table

Tables can be converted to data frames with asDF or as.data.frame. For example:

results$summaryTable$asDF

as.data.frame(results$summaryTable)

sbalci/ClinicoPathJamoviModule documentation built on June 13, 2025, 9:34 a.m.