rDNAterms: Ribosomal DNA (rDNA) Search Terms
In sborstein/AnnotationBustR: Extract Subsequences from GenBank Annotations
rDNAterms R Documentation
Ribosomal DNA (rDNA) Search Terms
Description
A data frame containing search terms for ribosomal RNA loci. Can be subset for loci of
interest. Columns are as follows and users should follow the column format if they wish to
add search terms using the MergeSearchTerms function:
Usage
rDNAterms
Format
A data frame of of 7 rows and 3 columns
Locus: Locus name, FASTA files will be written with this name
Type: Type of subsequence, either rRNA or misc_RNA
Name:Name of synonym for a locus to search for
See Also
MergeSearchTerms
sborstein/AnnotationBustR documentation built on Feb. 18, 2024, 11:04 p.m.
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| rDNAterms | R Documentation |
Ribosomal DNA (rDNA) Search Terms
Description
A data frame containing search terms for ribosomal RNA loci. Can be subset for loci of interest. Columns are as follows and users should follow the column format if they wish to add search terms using the MergeSearchTerms function:
Usage
rDNAterms
Format
A data frame of of 7 rows and 3 columns
Locus: Locus name, FASTA files will be written with this name
Type: Type of subsequence, either rRNA or misc_RNA
Name:Name of synonym for a locus to search for
See Also
MergeSearchTerms
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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