R/TMHMM.R

In schifferl/TMHMM: Transmembrane Helix Prediction

#' Set of 160 Membrane Proteins Used as a Cross-Validation Set
#'
#' @format A `data.frame` with 160 rows and 6 variables:
#' \describe{
#'     \item{PROTEIN}{the Swiss-Prot identifier}
#'     \item{SEQUENCE}{the amino acid sequence}
#'     \item{TOPOLOGY}{the true topology sequence (I = inside, M = membrane,
#'                     O = outside)}
#'     \item{PARTITION}{the cross-validation partition}
#'     \item{PREDICTION}{the predicted topology sequence (I = inside,
#'                       M = membrane, O = outside)}
#'     \item{VALIDATION}{the validated topology sequence (I = inside,
#'                       M = membrane, O = outside)}
#' }
#'
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.0.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.1.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.2.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.3.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.4.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.5.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.6.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.7.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.8.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.9.labels}
#' @source \url{http://www.cbs.dtu.dk/~krogh/TMHMM/160.predictions}
"TMHMM"