Earth Mover's Distance for Differential Analysis of Genomics Data

calculate_cvm | Cramer von Mises for differential analysis of genomics data |

calculate_cvm_gene | Calculate CVM score for a single gene |

calculate_emd | Earth Mover's Distance for differential analysis of genomics... |

calculate_emd_gene | Calculate EMD score for a single gene |

calculate_ks | Calculate the Komolgorov-Smirnov test statistic and q-values... |

calculate_ks_gene | Calculate KS score for a single gene |

CVMomics | Create an CVMomics object |

EMDomics | Create an EMDomics object |

emdomics-package | Earth Mover's Distance algorithm for differential analysis of... |

KSomics | Create an KSomics object |

plot_cvm_density | Plot distributions and CVM score for a gene. |

plot_cvmnull | Plot null distribution of permuted cvm scores vs. calculated... |

plot_cvmperms | Plot histogram of CVM scores calculated via random... |

plot_emd_density | Plot distributions and EMD score for a gene. |

plot_emdnull | Plot null distribution of permuted EMD scores vs. calculated... |

plot_emdperms | Plot histogram of EMD scores calculated via random... |

plot_ks_density | Plot distributions and KS score for a gene. |

plot_ksnull | Plot null distribution of permuted ks scores vs. calculated... |

plot_ksperms | Plot histogram of KS scores calculated via random... |

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