visstats: Visualization of the network and the basic network statistic

In schwemro/BiNetEIA: Visual and Statistical Tools to Analyse and Interpret the Interaction Matrix from Environmental Impact Assessment (EIA) as a Bipartite Network

Description

The bipartite network from the interaction matrix is build, visualized and the basic network statistics are computed

Usage

visstats(mat.int, negative.values = TRUE, vcat, vcat.env.comps, vcat.actions)

Arguments

mat.int	Interaction matrix as matrix
negative.values	Defines if interaction matrix contains negative interactions. Default is set to TRUE.
vcat	A vector which contains the labels of the vertice categories.
vcat.env.comps	A vector which contains the vertice categories of the environmental components.
vcat.actions	A vector which contains the vertice categories of the actions.

Details

...

Value

Two data frames. bas.stats contains the results of the basic network statistic and deg includes the weighted vertice degrees and mean degrees.

Author(s)

Robin Schwemmle [e-mail]

See Also

assortativity_nominal, degree_tm, degree_w, distance_tm, distance_w, clustering_tm

Examples

data('tallahala')
vcat <- c("Water", "Land", "Biology", "Socioeconomy", "Infrastructure")
vcat.env.comps <- c(1,1,1,1,2,2,1,1,2,2,3,3,3,3,3,3,3,4,4,4,4)
vcat.actions <- c(1,1,1,5,5,5,1,3,3,5)
visstats(tallahala, negative.values = TRUE, vcat = vcat, vcat.env.comps = vcat.env.comps,
vcat.actions = vcat.actions)

data('eastkarun')
vcat <- c("Water", "Land", "Biology", "Socioeconomy")
vcat.env.comps <- c(1,2,2,2,2,1,1,3,3,3,3,3,3,4,4,4,4,4,4,4)
vcat.actions <- c(1,1,1,3,1)
visstats(eastkarun, negative.values = TRUE, vcat = vcat, vcat.env.comps = vcat.env.comps,
vcat.actions = vcat.actions)

data('kladovo')
vcat <- c("Water", "Land", "Biology", "Socioeconomy", "Infrastructure")
vcat.env.comps <- c(1,2,2,2,2,2,3,3,3,3,3,2,2,4,4,4)
vcat.actions <- c(5,5,5,5,5,5,5,5,5)
visstats(kladovo, negative.values = FALSE, vcat = vcat, vcat.env.comps = vcat.env.comps,
vcat.actions = vcat.actions)

schwemro/BiNetEIA documentation built on March 24, 2020, 12:05 a.m.