edgelist2matrix | Make a matrix from an edgelist on file. |
fastBM | Written by Liam J. Revell 2011 From the phytools package... |
getnetmets | Calculate network metrics on matrices. |
getnetmets2 | Calculate network metrics on matrices. |
nodeHeights | Written by Liam J. Revell 2011 From the phytools package... |
pbtree | Written by Liam J. Revell 2011 From the phytools package... |
randtips | Random traits - randomize traits across tips - shuffles... |
req | Easy require/library. |
simbal | Simulate balanced and unbalanced trees. |
simbal_plot | Plotting output from simbaltrees |
simbaltrees | Simulate a set of balanced and unbalanced trees. |
simbaltrees_topy | Simulate a set of balanced and unbalanced trees. |
sim_rand_nets | Measure aspects of traits on trees. |
sim_traits_nets | Simulate networks, with interactions propoprtional to trait... |
sim_traits_nets2 | Simulate networks, with interactions propoprtional to trait... |
sim_traits_nets_par | Simulate networks, with interactions propoprtional to trait... |
sim_traits_ontrees | Simulate traits on trees with various evolutionary models. |
traitsig | Measure aspects of traits on trees. |
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