simbal_plot: Plotting output from simbaltrees

Description Usage Arguments Examples

View source: R/simbal_plot.r

Description

Plotting output from simbaltrees

Usage

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  simbal_plot(output, netval, justdf = FALSE)

Arguments

output

Output from simbaltrees.

netval

A network metric used in your call to simbaltrees.

justdf

Return just the data.frame or not (default to FALSE).

Examples

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## Not run: 
netmets <- c("connectance", "nestedness","nodf2")
outout <- suppressMessages(llply(c(10, 15), function(x)
		simbaltrees(tips_p=10, metric="colless", numtrees=5, cutlow=-0.5, cuthigh=0.5,
		a=10, bounds=c(0,100), alpha=1, sigma=1, alpha_eb=-0.8, sigma_eb=3, cval=0.8,
		asymm=2, dumpmatrices=TRUE, matdir="~/newfiles2", netmets=netmets)
simbal_plot(outout, "connectance")

## End(Not run)

sckott/treeshape documentation built on May 26, 2017, 3:50 a.m.