simbal_plot: Plotting output from simbaltrees

In sckott/treeshape: treeshape fxns

Description

Plotting output from simbaltrees

Usage

  simbal_plot(output, netval, justdf = FALSE)

Arguments

output	Output from simbaltrees.
netval	A network metric used in your call to simbaltrees.
justdf	Return just the data.frame or not (default to FALSE).

Examples

## Not run: 
netmets <- c("connectance", "nestedness","nodf2")
outout <- suppressMessages(llply(c(10, 15), function(x)
		simbaltrees(tips_p=10, metric="colless", numtrees=5, cutlow=-0.5, cuthigh=0.5,
		a=10, bounds=c(0,100), alpha=1, sigma=1, alpha_eb=-0.8, sigma_eb=3, cval=0.8,
		asymm=2, dumpmatrices=TRUE, matdir="~/newfiles2", netmets=netmets)
simbal_plot(outout, "connectance")

## End(Not run)

sckott/treeshape documentation built on May 29, 2019, 4:07 p.m.