In sdtaylor/phenometR: An interface to the Phenomet database

Phenophase Info

Use the codes below to filter for specific phenophases. Note that status phenophases are 0/1 while count phenophases are abundances or percentages.

This information can also be optained from get_phenophase_metadata().

| Functional Group | Phenophase Type | Phenophase Code | Phenophase Description | |------------------|-----------------|-----------------|--------------------------------------------------------------------| |Evergreen Shrub| status | BE_01 | Breaking leaf buds for evergreen shrubs | | | status | BE_02 | Young unfolded leaves for evergreen shrubs | | | status | BE_03 | Flower buds for evergreen shrubs | | | status | BE_04 | Open flowers for deciduous shrubs | | | status | BE_05 | Full flowering for evergreen shrubs | | | status | BE_06 | Unripe fruits for evergreen shrubs | | | status | BE_07 | Ripe fruits for evergreen shrubs | | | count | BE_203 | Number of flower buds for evergreen shrubs | | | count | BE_204 | Number of open flowers for evergreen shrubs | | | count | BE_205 | Percentage of flowers open for evergreen shrubs | | | count | BE_206 | Number of unripe fruits for evergreen shrubs | | | count | BE_207 | Number of ripe fruits for evergreen shrubs | | Succulent | status | CA_01 | Flower buds for cacti | | | status | CA_02 | Open flowers for cacti | | | status | CA_03 | Unripe fruits for cacti | | | status | CA_04 | Ripe fruits for cacti | | | status | CA_05 | Full flowering for cacti | | | count | CA_201 | Number of flower buds for cacti | | | count | CA_202 | Number of open flowers for cacti | | | count | CA_203 | Number of unripe fruits for cacti | | | count | CA_204 | Number of ripe fruits for cacti | | | count | CA_205 | Percentage of flowers open for cacti | |Deciduous Shrub| status | DS_01 | Breaking leaf buds for deciduous shrubs | | | status | DS_02 | Leaves for deciduous shrubs | | | status | DS_03 | >25% and <75% of full leaf size for deciduous shrubs | | | status | DS_04 | >/=75% of full leaf size for deciduous shrubs | | | status | DS_05 | >50% of leaves fallen for deciduous shrubs | | | status | DS_06 | All leaves fallen for deciduous shrubs | | | status | DS_07 | Flower buds for deciduous shrubs | | | status | DS_08 | Open flowers for deciduous shrubs | | | status | DS_09 | Full flowering for deciduous shrubs | | | status | DS_10 | Unripe fruits for deciduous shrubs | | | status | DS_11 | Ripe fruits for deciduous shrubs | | | status | DS_12 | Recent fruit drop for deciduous shrubs | | | count | DS_202 | Percentage of leaves green for deciduous shrubs | | | count | DS_207 | Number of flower buds for deciduous shrubs | | | count | DS_208 | Number of open flowers for deciduous shrubs | | | count | DS_209 | Percentage of flowers open for deciduous shrubs | | | count | DS_210 | Number of unripe fruits for deciduous shrubs | | | count | DS_211 | Number of ripe fruits for deciduous shrubs | | | count | DS_213 | Colored leaves for deciduous shrubs | | | count | DS_214 | Percentage of canopy full with colored leaves for deciduous shrubs | | Perennial Grass | status | GR_01 | Initial growth for perennial grasses | | | status | GR_02 | Leaves for perennial grasses | | | status | GR_03 | All leaves withered for perennial grasses | | | status | GR_04 | Flower heads for perennial grasses | | | status | GR_05 | Open flowers for perennial grasses | | | status | GR_06 | Unripe fruits for perennial grasses | | | status | GR_07 | Ripe fruits for perennial grasses | | | status | GR_08 | More green than brown for perennial grasses | | | status | GR_09 | Full flowering for perennial grasses | | | count | GR_202 | Percentage of canopy green for perennial grasses | | | count | GR_204 | Number of flower heads for perennial grasses | | | count | GR_205 | Number of open flowers for perennial grasses | | | count | GR_206 | Number of unripe fruits for perennial grasses | | | count | GR_207 | Number of ripe fruits for perennial grasses | | | count | GR_209 | Percentage of flowers open for perennial grasses |

sdtaylor/phenometR documentation built on Sept. 15, 2021, 6:35 a.m.