best_model_fit: Return Model Fit for Plotting

In seabbs/DirectEffBCGPolicyChange: Estimating the direct effect of the 2005 UK BCG vaccination policy change.

Description

Extracts a given model and refits it, returning the fitted model object.

Usage

best_model_fit(df = NULL, ModelBestFit = NULL, Scheme = NULL,
  Pop = NULL, Cores = NULL, Iterations = 10000, BurnIn = 5000,
  Alpha = 0.99, Treedepth = 10)

Arguments

df	A dataframe of fitted model results
ModelBestFit	A character string identifying the model to refit.
Scheme	A character string identifying which scheme to refit the model for.
Pop	A character string identifying the population to refit the model for.
Cores	Numeric, defaults to the number of cores available minus 1. How many cores to use for the analysis.
Iterations	Numeric, the number of iterations to use for the MCMC sampler. Defaults to 10000.
BurnIn	Numeric, the number of iterations to use for the burn in. Defaults to 5000.
Alpha	Numeric, set the adaptive alpha value for the MCMC. Defaults to 0.99
Treedepth	Numeric, set the maximum tree depth. Defaults to 10.

Value

Fitted model object

See Also

Base_Model

seabbs/DirectEffBCGPolicyChange documentation built on Dec. 14, 2019, 9:24 p.m.