In seabbs/epict: Flexible Cycle Threshold Modelling

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  eval = FALSE
)

Piecewise linear cycle threshold model

Symptom onset model

Structural and invididual-level variation

Implementation

The model is implemented in stan using cmdstanr with no defaults altered[@stan; @cmdstanr]. epict incorporates additional functionality written in R[@R] to enable plotting cycle threshold posterior predictions, summarising population-level cycle thresolhs, and summarsing covariate effects. All functionality is modular allowing users to extend and alter the underlying model whilst continuing to use the package framework.