process_and_load_dataset: Process and load a dataset

In seandavi/RefineBio: The bridge between refine.bio and Bioconductor

Process and load a dataset

Description

This function will process and load a dataset from RefineBio. It is intended for use with the rb_get_experiment function. However, it can be used with any dataset that has been registered by RefineBio. This function will download, extract, and load the data from RefineBio for the given dataset.

Usage

process_and_load_dataset(ds, base_path = datastore_get_path())

Arguments

ds	The dataset ID or rb_dataset object
base_path	The path to the directory where the dataset will be downloaded and extracted.

Value

A list of SummarizedExperiments representing the experiments in the RefineBio downloaded dataset.

seandavi/RefineBio documentation built on June 1, 2025, 4:10 p.m.