Man pages for seandavi/Rpressa
A collection of useful code for bioinformatics
| AgilentSet-class | Class "AgilentSet" |
| combine-methods | Methods for Function combine in Package 'Biobase' |
| dlrs | Calculate the Derivative Log Root Square (DLRS) |
| feparams | Access the Feature Extraction parameters from Agilent text... |
| feparams-methods | Get fe params for an Agilent data object |
| festats | Accessor for festats slot |
| festats-methods | Accessor for festats slot |
| getQueryCounts | Return query counts for batch PubMed queries |
| idat2lumibatch | Read idat files into a lumiBatch object |
| illuminaPvalCalculation | Encapsulates a vectorized p-value calculation for Illumina... |
| oligonucleotideFrequencyByChromosome | Find oligonucleotide frequencies for multiple chromosomes |
| pubmedQuery | Return results of a PubMed query |
| readAgilent | Read Agilent .txt files |
| read.snpChip | Read in split Illumina snp chip files |
| Rpressa-package | A collection of code for bioinformatics |
| splitAgilentChromLocs | Split Chromosome Locations from Agilent CGH arrays |
| targeted | Sample AlignedRead data set for targeted sequencing... |
| threeMedianSmooth | Moving three-point median smoothing |
