cromwellOutputs: Get output paths associated with one or more workflow ids

Description Usage Arguments Value References Examples

View source: R/api.R

Description

Get output paths associated with one or more workflow ids

Usage

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Arguments

ids

a character vector of Cromwell ids. See cromwellQuery for details of how to query Cromwell for available ids.

...

passed directly to httr 'POST' (for including 'timeouts', 'handles', etc.)

Value

a list of output lists.

References

https://github.com/broadinstitute/cromwell#get-apiworkflowsversionidoutputs

Examples

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## Not run: 
res = cromwellQuery(terms=c(status='Succeeded',name='taskName'))
head(res)
outfilelist = cromwellOutputs(res$id)
str(outfilelist,list.len=5)

## End(Not run)

seandavi/wdlRunR documentation built on Oct. 28, 2021, 12:42 a.m.