make.dendro.plot.ts: Plotting Dendrometer Band Time Series

In seanmcm/RDendrom: Plots and fits logistic function to dendrometer band time series.

Plotting Dendrometer Band Time Series

Description

Plotting Dendrometer Band Time Series

Usage

make.dendro.plot.ts(ts.data, params = NULL, day = seq(365),
  ts.number = 0, outlier = TRUE, unit = "cm", par.names = c("L",
  "K", "doyip", "r", "theta", "a", "b", "alt.a"))

Arguments

ts.data	A dataframe of a time series of a single tree in a year. Must have column variables DBH_TRUE (numeric) and DOY (integer).
params	dataframe vector (i.e., there are names associated with the vector elements)
day	integer vector
outlier	logical
par.names	A character vector of the column names of the params vector. This is used to pull out actual parameters from other information.

Value

A plot of the dbh and doy of a single band in a year, with, optionally, a fitted line from the optimize output and outlier denotion in red.

See Also

get.params, which creates Dendro.split, a list vector containing time-series dataframes for every tree, year, band.

seanmcm/RDendrom documentation built on March 2, 2024, 3:53 p.m.