Man pages for sebastianduchene/ClockstaR
ClockstaR: choosing the number of relaxed-clock models in molecular phylogenetic analysis
| bsd.dist | Estimate sBSDmin distnace between a pair of trees |
| bsd.matrix | Estimate the sBSDmin distance for all pairs of trees in a... |
| bsd.matrix.para | Estimate the sBSDmin distance for all pairs of trees in a... |
| ClockstaR2-package | ClockstaR: choosing the number of relaxed-clock models in... |
| clockstar.interactive | Run clockstar interactively |
| optim.trees.interactive | Optimise the branch lengths of gene trees interactively |
| partition_data_partitionfinder | partition data from a PartitionFinder output file |
| partitions | function partitions applied to objects of class bsd |
| partitions.bsd | Obtain optimal partitioning scheme |
| partitions.topomat | Obtain optimal topology partitioning scheme |
| plot.partitions | plot objects of class partitions |
| topo.matrix | Estimate the topology distance for all pairs of trees in a... |
