EndoscopyEvent: EndoscopyEvent

In sebastiz/EndoMineR_devlop: Functions to mine endoscopic and associated pathology datasets

Description

This extracts the endoscopic event. It looks for the event term and then looks in the event sentence as well as the one above to see if the location is listed. It needs to be run AFTER the HistolTypeAndSite function as emr needs to be added to the event. Used in the OPCS4 coding

Usage

EndoscopyEvent(dataframe, EventColumn1, Procedure, Macroscopic, Histology)

Arguments

dataframe	datafrane of interest
EventColumn1	The relevant endoscopt free text column describing the findings
Procedure	Column saying which procedure was performed
Macroscopic	Column describing all the macroscopic specimens
Histology	Column with free text histology (usually microscopic histology)

Value

This returns a character vector

Examples

# Myendo$EndoscopyEvent<-EndoscopyEvent(Myendo,"Findings",
#"ProcedurePerformed","MACROSCOPICALDESCRIPTION","HISTOLOGY")

sebastiz/EndoMineR_devlop documentation built on May 29, 2019, 7:33 a.m.