ExtrapolateEndoscopicICD10: Primary Diagnosis from Endoscopy

In sebastiz/EndoMineR_devlop: Functions to mine endoscopic and associated pathology datasets

Description

This function extracts the primary diagnosis from the endoscopy free text. It will also add pathology diagnosis to the final primary code

Usage

ExtrapolateEndoscopicICD10(dataframe, Procedure, PathSite, FINDINGS,
  ENDOSCOPICDIAGNOSIS, EndoscopyEvent)

Arguments

dataframe	the dataframe
Procedure	the Procedure column
PathSite	the PathSite column
FINDINGS	the FINDINGS column
ENDOSCOPICDIAGNOSIS	the ENDOSCOPICDIAGNOSIS column
EndoscopyEvent	the EndoscopyEvent column

Examples

# Need to run the HistolTypeSite and EndoscopyEvent functions first here
# SelfOGD_Dunn$OPCS4w<-ExtrapolateOPCS4Prep(SelfOGD_Dunn,"PROCEDUREPERFORMED",
# "PathSite","EndoscopyEvent")

sebastiz/EndoMineR_devlop documentation built on May 29, 2019, 7:33 a.m.