download_best_assembly: Download_best_assembly

View source: R/FindBestRefseqAssembly.R

download_best_assemblyR Documentation

Download_best_assembly

Description

Download_best_assembly

Usage

download_best_assembly(taxid_of_interest, download_stats = TRUE, ...)

Arguments

taxid_of_interest

taxonomyID (int)

...

Arguments passed on to refseq_download_genome_assembly

target_assembly_accession

accession of assembly you're interested in. For example GCF_000371765.1 (string)

output_folder

directory to output file into (string)

refseq_data_frame

do not reccomend changing this. Automatically loads from load_refseq_data_frame_from_cache()

Value

path to downloaded file


selkamand/utilitybeltrefseq documentation built on July 7, 2022, 7:35 a.m.