Files in sempwn/cr0eso
Estimation of R0 For Multiple Outbreaks

.Rbuildignore
.github/.gitignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/SEIR_outbreak_model_fitting.R R/cr0eso-package.R R/create_tables.R R/data.R R/plotting.R R/utils.R README.md
_pkgdown.yml
cr0eso.Rproj
data/BC_LTHC_outbreaks_100Imputs.rda
data/BC_OSABC_facilitydata.rda
data/bc_fit.rda
data/bc_fit_zeta.rda
data/mod.rda
docs/404.html
docs/LICENSE-text.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/BC_LTHC_additional_analysis.html
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-11-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-2-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-3-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-4-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-4-2.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-6-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-6-2.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-7-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-8-1.png
docs/articles/BC_LTHC_additional_analysis_files/figure-html/unnamed-chunk-9-1.png
docs/articles/BC_LTHC_additional_analysis_files/header-attrs-2.10/header-attrs.js
docs/articles/BC_LTHC_additional_analysis_files/header-attrs-2.13/header-attrs.js
docs/articles/BC_LTHC_additional_analysis_files/header-attrs-2.8/header-attrs.js
docs/articles/BC_LTHC_additional_analysis_files/kePrint-0.0.1/kePrint.js
docs/articles/BC_LTHC_additional_analysis_files/lightable-0.0.1/lightable.css
docs/articles/BC_outbreak_data_fitting.html
docs/articles/BC_outbreak_data_fitting_files/figure-html/load data-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/model diagnostic plot-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/model diagnostic plot-2.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/model diagnostic plot-3.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/model diagnostic plot-4.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-1-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-10-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-11-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-12-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-2-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-3-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-4-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-4-2.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-5-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-6-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-7-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-8-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-9-1.png
docs/articles/BC_outbreak_data_fitting_files/figure-html/unnamed-chunk-9-2.png
docs/articles/BC_outbreak_data_fitting_files/header-attrs-2.10/header-attrs.js
docs/articles/BC_outbreak_data_fitting_files/header-attrs-2.13/header-attrs.js
docs/articles/BC_outbreak_data_fitting_files/header-attrs-2.6/header-attrs.js
docs/articles/BC_outbreak_data_fitting_files/header-attrs-2.8/header-attrs.js
docs/articles/BC_outbreak_data_fitting_files/kePrint-0.0.1/kePrint.js
docs/articles/BC_outbreak_data_fitting_files/lightable-0.0.1/lightable.css
docs/articles/index.html
docs/articles/introduction_to_fitting.html
docs/articles/introduction_to_fitting_files/figure-html/unnamed-chunk-4-1.png
docs/articles/introduction_to_fitting_files/figure-html/unnamed-chunk-5-1.png
docs/articles/introduction_to_fitting_files/figure-html/unnamed-chunk-6-1.png
docs/articles/introduction_to_fitting_files/figure-html/unnamed-chunk-7-1.png
docs/articles/introduction_to_fitting_files/header-attrs-2.10/header-attrs.js
docs/articles/introduction_to_fitting_files/header-attrs-2.13/header-attrs.js
docs/articles/introduction_to_fitting_files/header-attrs-2.6/header-attrs.js
docs/articles/introduction_to_fitting_files/header-attrs-2.7/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/BC_LTHC_outbreaks_100Imputs.html
docs/reference/BC_OSABC_facilitydata.html
docs/reference/Rplot001.png
docs/reference/bc_fit.html
docs/reference/bc_fit_zeta.html
docs/reference/cr0eso-package.html
docs/reference/create_pub_tables.html
docs/reference/figures/logo.png
docs/reference/hom_extract_posterior_draws.html
docs/reference/hom_plot_counterfactual_by_location.html
docs/reference/hom_plot_critical_times_by_location.html
docs/reference/hom_plot_incidence_by_location.html
docs/reference/hom_plot_r0_by_location.html
docs/reference/hom_plot_zeta_by_location.html
docs/reference/index.html
docs/reference/prior_list.html
docs/reference/seir_model_fit.html
inst/include/stan_meta_header.hpp
inst/stan/hierarchical_SEIR_incidence_model.stan
inst/stan/include/license.stan
man/BC_LTHC_outbreaks_100Imputs.Rd man/BC_OSABC_facilitydata.Rd man/bc_fit.Rd man/bc_fit_zeta.Rd man/cr0eso-package.Rd man/create_pub_tables.Rd
man/figures/logo.png
man/hom_extract_posterior_draws.Rd man/hom_plot_counterfactual_by_location.Rd man/hom_plot_critical_times_by_location.Rd man/hom_plot_incidence_by_location.Rd man/hom_plot_r0_by_location.Rd man/hom_plot_zeta_by_location.Rd man/prior_list.Rd man/seir_model_fit.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
vignettes/BC_LTHC_additional_analysis.Rmd vignettes/BC_outbreak_data_fitting.Rmd vignettes/introduction_to_fitting.Rmd
sempwn/cr0eso documentation built on Aug. 21, 2022, 1:35 a.m.