API for sgaichas/atlantisdiagnostics
Process Atlantis model output and implements model performance diagnostics
| Global functions | |
|---|---|
| add.title | Source code |
| agg_custom | Source code |
| atlantisdiagnostics | Man page |
| atlantisdiagnostics-package | Man page |
| bind.save | Source code |
| calc_mef | Source code |
| check_param_files | Source code |
| check_species_codes | Source code |
| check_string | Source code |
| coefs | Source code |
| compare_spatial_vars | Man page Source code |
| diag_cohortBiomass | Man page Source code |
| diag_combine | Man page Source code |
| diag_fleet_catch | Man page Source code |
| diag_footprints | Man page Source code |
| diag_maxsize | Man page Source code |
| diag_maxsize_txt | Source code |
| diag_persistence | Man page Source code |
| diag_reasonability | Man page Source code |
| diag_stability | Man page Source code |
| diag_temp_thresholds | Man page Source code |
| fitlm | Source code |
| fittedVal | Source code |
| get_atl_paramfiles | Man page Source code |
| get_consumption | Source code |
| get_forcing_temperature | Man page Source code |
| get_model_biomass | Source code |
| get_param_FXXX_SY | Man page Source code |
| get_param_move_temp | Man page Source code |
| get_param_recruit_hdistrib | Man page Source code |
| get_param_recruit_vdistrib | Man page Source code |
| get_param_vert | Man page Source code |
| get_rawdata | Source code |
| get_run_prm | Man page Source code |
| make_atlantis_diagnostic_figures | Man page Source code |
| meanData | Source code |
| pVals | Source code |
| plot_biomass_box_range | Source code |
| plot_biomass_box_season | Source code |
| plot_overall_predation | Source code |
| plot_sp | Source code |
| process_atl_output | Man page Source code |
| process_catch_fleet | Man page Source code |
| process_vertical_distrib | Source code |
| run.filename | Source code |
| subset_diet | Source code |
