get_name: Get the full name of a brain region given structure IDs

In sgrote/ABAEnrichment: Gene expression enrichment in human brain regions

Description

Returns the full name of brain regions given the structure IDs, e.g. 'Allen:10657' as used throughout the ABAEnrichment package. The full name is composed of an acronym and the name as used by the Allen Brain Atlas project [1-2].

Usage

    get_name(structure_ids)

Arguments

structure_ids

a vector of brain structure IDs, e.g. c('Allen:10657','Allen:10173') or c(10657,10173)

Value

vector of the full names of the brain structures; composed of acronym, underscore and name.

Note

The acronym is added because the names alone are not unique.

Author(s)

Steffi Grote

References

[1] Allen Institute for Brain Science. Allen Human Brain Atlas. Available from: http://human.brain-map.org/
[2] Allen Institute for Brain Science. BrainSpan Atlas of the Developing Human Brain. Available from: http://brainspan.org/

See Also

get_id
get_sampled_substructures
get_superstructures

Examples

## get the full names of the brain structures 'Allen:10657' and 'Allen:10225'
get_name(c('Allen:10657','Allen:10225'))

sgrote/ABAEnrichment documentation built on July 15, 2019, 9:38 p.m.