Man pages for shamansim/Vizection
Visualisation and dissection of single-cell transcriptomics big datasets
| addGroupName | Add group name to samples |
| addNumberOfSamples | Add number to group names |
| contentgenesPCA | Vizection's Principal Component Analysis |
| contentheatmapGenes | Plots Vizection's heatmap of correlations. |
| corMat | Calculate a correlation matrix. |
| distCorMat | Convert correlation to distance |
| filterExtractedBool | filterExtractedBool |
| filterSelectionBool | Apply filters to samples |
| filterSelectionBoolFinal | filterSelectionBoolFinal |
| genesDend | Complete hierarchical clustering |
| genesDend2 | Cluster a distance matrix with the complete method. |
| pcaCompGenesList | pcaCompGenesList |
| plotEigenValues | Plot Eigen Values |
| plotHTB | plot head and tail as barplot. |
| subgenes_1 | subgenes |
| sublibs | sublibs |
| UNaddNumberOfSamplesOrGroup | Clear sample or group names. |
| vizection | Launch the Vizection shiny application. |
| vizectionExampleEnv | vizection example environment |
| vizectionExampleGenes | vizection example "genes" table |
| vizectionExampleLibs | vizection example "libs" table |
| vizectionValidate | Validate objects passed to Vizection |
