Man pages for shamansim/Vizection
Visualisation and dissection of single-cell transcriptomics big datasets

addGroupNameAdd group name to samples
addNumberOfSamplesAdd number to group names
contentgenesPCAVizection's Principal Component Analysis
contentheatmapGenesPlots Vizection's heatmap of correlations.
corMatCalculate a correlation matrix.
distCorMatConvert correlation to distance
filterExtractedBoolfilterExtractedBool
filterSelectionBoolApply filters to samples
filterSelectionBoolFinalfilterSelectionBoolFinal
genesDendComplete hierarchical clustering
genesDend2Cluster a distance matrix with the complete method.
pcaCompGenesListpcaCompGenesList
plotEigenValuesPlot Eigen Values
plotHTBplot head and tail as barplot.
subgenes_1subgenes
sublibssublibs
UNaddNumberOfSamplesOrGroupClear sample or group names.
vizectionLaunch the Vizection shiny application.
vizectionExampleEnvvizection example environment
vizectionExampleGenesvizection example "genes" table
vizectionExampleLibsvizection example "libs" table
vizectionValidateValidate objects passed to Vizection
shamansim/Vizection documentation built on Oct. 17, 2017, 7:52 p.m.