check_datatype: Check if the required and recommended global and...

In sharksmhi/tryout: Automatic quality control of physical, chemical and marine biological data generated by the SHARK system

Description

Missing or empty required fields are reported as errors, missing or empty recommended fields are reported as warnings.

Usage

# Global
check_datatype(data, level = "error") 
# Datatype-specific
check_Bacterioplankton(data, level = "error")
check_Chlorophyll(data, level = "error")
check_Epibenthos(data, level = "error")
check_EpibenthosDropvideo(data, level = "error")
check_GreySeal(data, level = "error")
check_HarbourPorpoise(data, level = "error")
check_HarbourSeal(data, level = "error")
check_PhysicalChemical(data, level = "error")
check_Phytoplankton(data, level = "error")
check_Picoplankton(data, level = "error")
check_PrimaryProduction(data, level = "error")
check_RingedSeal(data, level = "error")
check_SealPathology(data, level = "error")
check_Sedimentation(data, level = "error")
check_Zoobenthos(data, level = "error")
check_Zooplankton(data, level = "error")

Arguments

data	The data frame.
level	The level of error reporting, i.e. "error" or "warning". Recommended fields are only checked in case of "warning".

Value

Any warnings or errors.

sharksmhi/tryout documentation built on Dec. 27, 2019, 5:34 a.m.