bindProteins: bindProteins

Description Usage Arguments Value

Description

the bindProteins function

Usage

1
2
bindProteins(proteinGraph, speedDate, bindingAffinity, propSpeedDating = 0.75,
  bindingLength = 5)

Arguments

proteinGraph

is an igraph object specifying the protein-protein bindings

speedDate

is the matrix of cells that should speed date

bindingAffinity

is the matrix of binding affinities for the different proteins

propSpeedDating

proportion of speed dating pairs that should actually bind

bindingLength

number of timesteps in which the highest affinity proteins should bind

Value

igraph a proteinGraph object with new protein-protein bindings specified


shazanfar/cellAggregator documentation built on May 14, 2019, 7:35 a.m.