cellAggregationBarplot: cellAggregationBarplot

In shazanfar/cellAggregator: Network simulation of cell-cell aggregation assays

Description

the cellAggregationBarplot function

Usage

cellAggregationBarplot(cellAggregationResult)

Arguments

cellAggregationResult

result object obtained from running cellAggregator()

Value

ggplot ggplot object of barplot of number of edges of each type per timestep

Examples

numCells = c(25,25)
numProtsPerCell = rbind(c(5,0,0),c(5,5,5))
bindingAffinity = cbind(c(1,0,0), c(0,1,0), c(0,0,1))

cellAggregationResult = cellAggregator(
 numCells,
 numProtsPerCell,
 bindingAffinity,
 timesteps = 100,
 burnIn = 0.75,
 verbose = TRUE,
 includeListOfGraphs = TRUE,
 plot = TRUE
)

cellAggregationResult$t_index
unlist(cellAggregationResult$listoftIndex)
cellAggregationBarplot(cellAggregationResult)

shazanfar/cellAggregator documentation built on May 14, 2019, 7:35 a.m.