dnaplotr: Functions to plot out a collection of DNA sequences

dnaplotrR Documentation

Functions to plot out a collection of DNA sequences

Description

Produce a visual representation of a vector of DNA sequences

Details

The main function is:

plotDNA:

to produce a plot from a vector of DNA sequences

And main helper functions are:

replaceOuterGaps:

to mark gaps at the ends of sequences differently than internal indels

A vignette is a available using vignette('example',package='dnaplotr').

Author(s)

Scott Sherrill-Mix, shescott@upenn.edu

Examples

seqs<-c('ACTGGA','ACTGCA','ACTGGC')
plotDNA(seqs)

sherrillmix/dnaplotr documentation built on Oct. 29, 2022, 4:42 p.m.