combineAligns: Combine gapped alignments

Description Usage Arguments Value Author(s)

View source: R/leven.R

Description

Combine several pairs of reference, query alignments

Usage

1
combineAligns(refs, aligns, starts = NULL)

Arguments

refs

The gapped reference sequences (one for each query)

aligns

The gapped query sequences

starts

If refs start at different locations add .'s so all start at 1

Value

A vector of the aligned strings with gaps added

Author(s)

Scott Sherrill-Mix [email protected]


sherrillmix/levenR documentation built on May 26, 2017, 8:08 a.m.