Grouped_BoxVilion: Grouped_BoxVilion

In shineshen007/shine: Data analysis tools collection

Grouped_BoxVilion

Description

a function to draw BoxPlot

Usage

Grouped_BoxVilion(
  stat_type = "nonparametric",
  data_name = "data.csv",
  info_name = "info.csv",
  plot.type = "box",
  zscore = TRUE,
  palette = "nrc_npg",
  plot_nrow = 2,
  pairwise.display = "significant",
  p.adjust.method = "fdr",
  ylab = "Relative Abundance (log2)",
  levels = c("M1", "M2", "M3")
)

Arguments

stat_type	parametric
data_name	data.csv
info_name	info_name
plot.type	box
zscore	default TRUE
palette	palette
plot_nrow	plot_nrow
pairwise.display	significant
p.adjust.method	fdr
ylab	name
levels	order of group

Value

All the results can be got form other functions and instruction.

Author(s)

Shine Shen [e-mail]

shineshen007/shine documentation built on Feb. 16, 2025, 9:16 p.m.