PathwayEnrich: PathwayEnrich

In shineshen007/shine: Data analysis tools collection

PathwayEnrich

Description

a function to do PathwayAnalysis

Usage

PathwayEnrich(
  specias_pathway_database = hsa.kegg.pathway,
  specias_compound_database = hsa_compound_ID,
  font_size = 20,
  data_name = "data_pathway.csv",
  color = c("#3399FF", "#FF3333"),
  All_ID = TRUE,
  seed = FALSE,
  grade1_2 = FALSE
)

Arguments

specias_pathway_database	the specia of sample
specias_compound_database	the specia of sample
font_size	20
data_name	the data_name
color	color
All_ID	default is FALSE
seed	default is TRUE
grade1_2	default is FALSE

Value

All the results can be got form other functions and instruction.

Author(s)

Xia Shen [e-mail]

shineshen007/shine documentation built on Feb. 16, 2025, 9:16 p.m.