importChrom: Import an Agilent MassHunter chromatogram from a csv file...
In shirewoman2/LaurasHelpers: Miscellaneous Helper Functions for Common PK or Analytical Chemistry Tasks
importChrom R Documentation
Import an Agilent MassHunter chromatogram from a csv file into a useful
format
Description
This function takes a csv file that was generated by exporting TIC, SIM, MRM,
or binary-pump pressure chromatograms from Agilent MassHunter Qualitative
Analysis and tidies the data into a useful data.frame since the output from
Agilent software is so weird. Input is a character string that is the name of
the csv file.
Usage
importChrom(csvfile, saveFile = FALSE)
Arguments
csvfile
The csv file name that was exported from MassHunter Qual
Value
Output is a tidy data.frame with columns indicating the file, the
chromatogram type, the ionization mode, the retention time, the counts,
etc. If saveFile is set to TRUE, a new csv file of the tidied
chromatographic data will be saved in the same directory, and it will have
"- tidy" appended to the input file name.
shirewoman2/LaurasHelpers documentation built on Oct. 22, 2023, 2:07 p.m.
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| importChrom | R Documentation |
Import an Agilent MassHunter chromatogram from a csv file into a useful format
Description
This function takes a csv file that was generated by exporting TIC, SIM, MRM, or binary-pump pressure chromatograms from Agilent MassHunter Qualitative Analysis and tidies the data into a useful data.frame since the output from Agilent software is so weird. Input is a character string that is the name of the csv file.
Usage
importChrom(csvfile, saveFile = FALSE)
Arguments
csvfile |
The csv file name that was exported from MassHunter Qual |
Value
Output is a tidy data.frame with columns indicating the file, the
chromatogram type, the ionization mode, the retention time, the counts,
etc. If saveFile is set to TRUE, a new csv file of the tidied
chromatographic data will be saved in the same directory, and it will have
"- tidy" appended to the input file name.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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