Files in shooshtarilab/scATAC.Explorer
A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata
.Rbuildignore
.github/Clustering&CellTypeAnnotations.R
.github/Hd5MatrixToSparseMatrix.R
.github/ISSUE_TEMPLATE/user-dataset-submission.md
.github/MarketMatrixToSparse.R
.github/SparseMatrixToDenseMatrix.R
.github/TextMatrixToSparseMatrix.R
.github/new_scATAC_metadata.csv
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/helpers.R
R/queryATAC.R
R/saveATAC.R
R/sysdata.rda
README.md
docs/app.json
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images/CarcinomaDatasets.png
images/CarcinomaDatasetsDataSummary.png
images/GSE144692DataSummary.png
images/GSE89362clusterPlot.png
images/GSE89362countsMatrix.png
images/MultipleDatasetExample.png
images/UMAPresults.png
images/cellTypeAnnotations.png
images/datasetsWithCellType.png
images/leukemiaQueryMetadataTable.png
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images/saveATACfiles.png
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man/queryATAC.Rd
man/saveATAC.Rd
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tests/testthat.R
tests/testthat/testdownloadfuncts.R
vignettes/.gitignore
vignettes/scATAC.Explorer.Rmd
